Multiplex Image Analysis Workshop : Preliminary Program
24 Sep - 25 Sep
| Tuesday, September 24, 2024 | Start | End | Location |
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Registration |
12:00 | 13:00 | Entrance and lobby |
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Multiplexing methods and techniques Session Chair: Sripad Ram |
13:00 | 17:45 | Main seminar room |
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Introduction to multiplex image analysis - Sripad Ram This will be an introductory talk that provides an overview of tissue multiplexing technologies and the current challenges in the analysis of multiplexing data. |
13:00 | 13:30 | |
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Comprehensive Profiling & Interactive Exploration of Multiplexed Immunofluorescence Images of Murine Whole Brain Slices # 109 Badrinath Roysam , Hien Van Nguyen , Saurabh Prasad , Rachel W. Mills , Jahandar Jahanipour , Xiaoyang Li , Aditi Singh , John B. Redell , Pramod Dash , Dragan Maric University of Houston, Houston, United States, |
13:30 | 14:00 | |
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Evaluating the TME using Chromogenic Multiplexed IHC and Deep Learning # 90 Kouther Noureddine , Calum MacAulay , Anna McGuire , Martial Guillaud , Paul Gallagher BC Cancer Research Centre, Vancouver, Canada, |
14:00 | 14:30 | |
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Molecular Pathology in Preclinical Safety Assessments # 105 Nathan Roscoe , Mathieu Marella Johnson & Johnson Innovative Medicine, San diego, United States, |
14:30 | 15:00 | |
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Coffee break Time for coffee, tea, cookies, networking and to visit the exhibits |
15:00 | 15:45 | |
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Quantitative 3D Imaging of bleomycin-induced pulmonary fibrosis in mouse lung # 106 Francios Olivier , Pradeep Rajasekhar , Mhairi Maxwell , Hojin Chang , Lachlan Whitehead , Greg Bass , Verena Wimmer , Kelly Rogers CSL Innovation, Melbourne, Australia, |
15:45 | 16:15 | |
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Segmentation error aware clustering, dimensionality reduction, and integration for highly multiplexed imaging data # 86 Yuju Lee , Kieran R. Campbell University of Toronto, Toronto, Canada, |
16:15 | 16:45 | |
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Exploring interplay between tumor intrinsic features & immune cell phenotypes in multi-tumor tissue microarrays by a single step 15-plex fluorescence IHC & imaging on the Orion Platform # 85 Richard VanKrieken , Jo Bender , Sophia Kekchidou , Michelle Burgin , Kristen Ruma , Naveen Dakappagari , Jennifer Bordeaux Navigate BioPharma Services, Carlsbad, United States, |
16:45 | 17:00 | |
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Sponsored presentation - Canopy Biosciences |
17:00 | 17:30 | Main seminar room |
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Short break |
17:30 | 17:45 | |
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Panel discussion - IT challenges for mxIF datasets Session Chair: Peter Sobolewski |
17:45 | 18:30 | Main seminar room |
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Chunky Yet Funky: The Future of Data Management in Multiplex 'Omics Imaging # 102 Peter Sobolewski The Jackson Laboratory, Farmington, United States, |
17:45 | 18:00 | |
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Panel discussion - Q&A |
18:00 | 18:30 | |
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Dinner |
18:30 | 20:30 | Main lobby area |
| Wednesday, September 25, 2024 | Start | End | Location |
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Nuclear/cell segmentation and phenotyping |
09:00 | 10:45 | Main seminar room |
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Quantitative and standardized pipeline for comparing nuclear segmentation platforms # 107 Shachi Mittal University of Washington, Seattle, United States, |
09:00 | 09:30 | |
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Deep-learning strategies for single-cell phenotyping in multiplex image analysis # 87 Harry Nunns NeoGenomics Laboratory, Aliso Viejo, United States, |
09:30 | 10:00 | |
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One Pixel to Many Objects Mapping for Nuclear Segmentation and Marker Evaluation in Spatial Biology # 91 Calum MacAulay , Shunsuke Ishige , Puneet Arora , Paul Gallagher , Martial Guillaud BC Cancer Research Institute, Vancouver, Canada, |
10:00 | 10:30 | |
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Benchmarking Cell Segmentation of MIBI and Lunaphore Images with Open-Source Software # 98 Mary Edith Brown University of Minnesota - Twin Cities, Minneapolis, United States, |
10:30 | 10:45 | |
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Coffee break Time for coffee, tea, cookies, networking and to visit the exhibits |
10:45 | 11:30 | |
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Multiplex image analysis - software features |
11:30 | 12:15 | Main seminar room |
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ariadne.ai SPATIAL: An intuitive workflow for multiplex image data analysis # 110 Fabian Nicolas Svara ariadne.ai, Buchrain, Switzerland, |
11:30 | 11:45 | |
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Q&A and discussion |
11:45 | 12:15 | |
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Sponsored presentation-Rarecyte Session Chair: Sripad Ram |
12:15 | 12:45 | Main seminar room |
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Lunch |
12:45 | 14:00 | Main lobby area |
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Multiplex image analysis applications |
14:00 | 15:30 | Main seminar room |
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Connections Across Scale: From Molecules to Multicell Modules # 101 John W. Hickey Duke University, Durham, United States, |
14:00 | 14:30 | |
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Unraveling functionally distinct metabolic programs to predict immunotherapy response in non-small cell lung cancer (NSCLC) # 93 Filippo Pullara PredxBio, Inc., Pittsburgh, United States, |
14:30 | 15:00 | |
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Single Cell Spatial Biomarkers in Lymphoma - Akil Merchant |
15:00 | 15:30 | |
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Coffee break Time for coffee, tea, cookies, networking and to visit the exhibits |
15:30 | 16:15 | |
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Multimodal approaches |
16:15 | 17:15 | Main seminar room |
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Spatial Instruction of T Cell Barrier Defense # 104 Miguel Reina-Campos La Jolla Institute for Immunology, La Jolla, United States, |
16:15 | 16:45 | |
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SpaceIQ™ – Cloud-Based Spatial Multi-Omics Software Platform with an Intelligent Suite of Unbiased Spatial Analytics and Explainable AI Tools # 96 Brian Falkenstein , Raymond Yan , Shannon Quinn , Akif Burak Tosun , Chakra Chennubhotla , Filippo Pullara PredxBio, Inc., Pittsburgh, United States, |
16:45 | 17:15 | |
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Short talks |
17:15 | 18:15 | Main seminar room |
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Unexpected Benefits of Web Tools for Scientific Image Processing in the Age of AI # 100 Andrey Aristov Institut Pasteur, Paris, France, |
17:15 | 17:30 | |
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Large-scale DNA Organization Identifies Aggressive Prostate Cancer in Low and Intermediate-Risk Patients Treated with Radical Prostatectomy # 97 Fumiya Inaba , Zhaoyang Chen , Anita Carraro , Paul Gallagher , Miha Pukl , Mira Keyes , Calum MacAulay , Martial Guillaud BC Cancer Research Institute, Vancouver, Canada, |
17:30 | 17:45 | |
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Short break |
17:45 | 18:00 | |
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Sponsored presentation - Navigating the multiplex image analysis workflow: from images to data-driven insights - Lunaphore |
18:00 | 18:30 | Main seminar room |
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GALA DINNER & poster session |
18:45 | 20:45 | Main lobby area |
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September 25 (Wednesday): GALA DINNER & poster session
18:09 - 20:09
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Quantitative analysis of chronic lymphocytic leukemia samples obtained by single-shot 17-plex staining followed by imaging with the Orion™ spatial biology platform # 89 Katrina Sanders , Edward Lo , Tad George , Antonio Cosma , Jérôme Paggetti , Martina Seiffert , Etienne Moussay , Selena Larkin RareCyte, Inc, Seattle, United States, |
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Challenges of multiplexed imaging on a core facility # 95 Aurélie Doméné , Perrine Paul-Gilloteaux Nantes Université, Nantes, France, |
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Large-scale DNA Organization Identifies Aggressive Prostate Cancer in Low and Intermediate-Risk Patients Treated with Radical Prostatectomy # 97 Fumiya Inaba , Zhaoyang Chen , Anita Carraro , Paul Gallagher , Miha Pukl , Mira Keyes , Calum MacAulay , Martial Guillaud BC Cancer Research Institute, Vancouver, Canada, |